Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase family protein | PHEP_RS18775 | Not Available | Negative | 4509002 - 4510489 | 55875.4 |
| abc transporter permease | PHEP_RS18780 | Not Available | Negative | 4510493 - 4511413 | 32060.7 |
| sugar abc transporter atp-binding protein | PHEP_RS18785 | Not Available | Negative | 4511424 - 4512902 | 54471.5 |
| substrate-binding domain-containing protein | PHEP_RS18790 | Not Available | Negative | 4512911 - 4513942 | 37526.5 |
| glycerophosphodiester phosphodiesterase | PHEP_RS18795 | Not Available | Negative | 4513973 - 4514830 | 31996.7 |
| zinc-dependent alcohol dehydrogenase | PHEP_RS18800 | Not Available | Negative | 4514835 - 4515860 | 37228.8 |
| sialate o-acetylesterase | PHEP_RS18805 | Not Available | Negative | 4515874 - 4517298 | 54076.9 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | PHEP_RS18810 | Not Available | Negative | 4517311 - 4518870 | 59092.7 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS18815 | Not Available | Negative | 4518894 - 4520714 | 69421.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS18820 | Not Available | Negative | 4520732 - 4524094 | 125061.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
