Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 28-related protein | PHEP_RS18725 | Not Available | Positive | 4497277 - 4500228 | 107411.0 |
| lysr substrate-binding domain-containing protein | PHEP_RS18730 | Not Available | Negative | 4500217 - 4501101 | 33231.8 |
| mfs transporter | PHEP_RS18735 | Not Available | Positive | 4501211 - 4502440 | 44917.3 |
| hypothetical protein | PHEP_RS18740 | Not Available | Negative | 4502459 - 4502941 | 17386.9 |
| crp/fnr family transcriptional regulator | PHEP_RS18745 | Not Available | Positive | 4503176 - 4503775 | 22684.7 |
| glxa family transcriptional regulator | PHEP_RS18750 | Not Available | Positive | 4503788 - 4504768 | 36883.2 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS18755 | Not Available | Negative | 4505023 - 4505889 | 32063.6 |
| laci family dna-binding transcriptional regulator | PHEP_RS18760 | Not Available | Positive | 4506173 - 4507189 | 38068.8 |
| glycerophosphodiester phosphodiesterase family protein | PHEP_RS18765 | Not Available | Negative | 4507223 - 4508107 | 33661.0 |
| carbohydrate kinase family protein | PHEP_RS18770 | Not Available | Negative | 4508100 - 4509005 | 33744.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
