Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | PHEP_RS18675 | Not Available | Negative | 4472618 - 4474612 | 74973.5 |
| porp/sprf family type ix secretion system membrane protein | PHEP_RS18680 | Not Available | Negative | 4474661 - 4475656 | 35616.7 |
| putative ig domain-containing protein | PHEP_RS18685 | Not Available | Negative | 4475703 - 4486331 | 361626.0 |
| hypothetical protein | PHEP_RS18690 | Not Available | Positive | 4486633 - 4489179 | 98964.5 |
| s8 family peptidase | PHEP_RS18695 | Not Available | Negative | 4489233 - 4490828 | 58175.8 |
| rrf2 family transcriptional regulator | PHEP_RS18700 | Not Available | Negative | 4490903 - 4491340 | 16339.1 |
| hypothetical protein | PHEP_RS18705 | Not Available | Positive | 4491760 - 4492071 | 11224.5 |
| sigma-54-dependent transcriptional regulator | PHEP_RS18710 | Not Available | Positive | 4492167 - 4493492 | 49293.6 |
| atp-binding protein | PHEP_RS18715 | Not Available | Negative | 4493493 - 4495970 | 93632.9 |
| patatin-like phospholipase family protein | PHEP_RS18720 | Not Available | Negative | 4496041 - 4497111 | 39680.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
