Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | PHEP_RS18575 | Not Available | Negative | 4442047 - 4443225 | 41816.7 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | PHEP_RS18580 | Not Available | Negative | 4443242 - 4445602 | 87136.2 |
| marr family winged helix-turn-helix transcriptional regulator | PHEP_RS18585 | Not Available | Negative | 4445635 - 4446102 | 17165.7 |
| atp-binding protein | PHEP_RS18590 | Not Available | Positive | 4446308 - 4447465 | 44259.9 |
| hypothetical protein | PHEP_RS18595 | Not Available | Negative | 4447586 - 4448293 | 27111.0 |
| hypothetical protein | PHEP_RS18600 | Not Available | Negative | 4448362 - 4448541 | 6640.01 |
| duf6089 family protein | PHEP_RS18605 | Not Available | Negative | 4449461 - 4450783 | 46912.6 |
| gamma-glutamyltransferase | PHEP_RS18610 | Not Available | Negative | 4450874 - 4452589 | 61587.1 |
| amp-dependent synthetase/ligase | PHEP_RS18615 | Not Available | Negative | 4452567 - 4454339 | 66620.8 |
| hypothetical protein | PHEP_RS18620 | Not Available | Positive | 4454556 - 4455035 | 17023.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
