Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2490 domain-containing protein | PHEP_RS18525 | Not Available | Negative | 4429360 - 4430061 | 27098.6 |
| hypothetical protein | PHEP_RS18530 | Not Available | Negative | 4430120 - 4431010 | 34008.5 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | PHEP_RS18535 | Not Available | Negative | 4431105 - 4432343 | 43631.7 |
| 2-oxoglutarate dehydrogenase e1 component | PHEP_RS18540 | Not Available | Negative | 4432362 - 4435157 | 105474.0 |
| merr family transcriptional regulator | PHEP_RS18545 | Not Available | Negative | 4435223 - 4436101 | 33681.4 |
| dash family cryptochrome | PHEP_RS18550 | Not Available | Negative | 4436247 - 4437539 | 49016.9 |
| tigr01777 family oxidoreductase | PHEP_RS18555 | Not Available | Positive | 4437748 - 4438662 | 33623.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PHEP_RS22000 | Not Available | Negative | 4438692 - 4439591 | 32879.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PHEP_RS18565 | Not Available | Negative | 4439588 - 4440082 | 18045.2 |
| acyl-coa dehydrogenase family protein | PHEP_RS18570 | Not Available | Negative | 4440244 - 4442034 | 65780.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
