Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4286 family protein | PHEP_RS01805 | Not Available | Negative | 427396 - 427698 | 11669.9 |
| tetratricopeptide repeat protein | PHEP_RS01810 | Not Available | Negative | 427714 - 429522 | 68878.4 |
| pas domain-containing protein | PHEP_RS01815 | Not Available | Positive | 429587 - 431092 | 57740.4 |
| prolyl oligopeptidase family serine peptidase | PHEP_RS01820 | Not Available | Positive | 431239 - 433137 | 72642.8 |
| sensor histidine kinase | PHEP_RS01825 | Not Available | Positive | 433149 - 434816 | 63691.1 |
| response regulator transcription factor | PHEP_RS01830 | Not Available | Positive | 434821 - 435510 | 26456.2 |
| hypothetical protein | PHEP_RS01835 | Not Available | Negative | 435507 - 436388 | 33574.9 |
| metallophosphoesterase | PHEP_RS01840 | Not Available | Negative | 436406 - 437665 | 47438.4 |
| sigma 54-interacting transcriptional regulator | PHEP_RS01845 | Not Available | Negative | 437687 - 439180 | 56446.6 |
| vwa domain-containing protein | PHEP_RS01850 | Not Available | Negative | 439180 - 440277 | 41578.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
