Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | PHEP_RS18325 | Not Available | Negative | 4384788 - 4385471 | 25359.2 |
| adenosylhomocysteinase | PHEP_RS18330 | Not Available | Positive | 4385635 - 4386951 | 48325.9 |
| polysaccharide deacetylase | PHEP_RS18335 | Not Available | Negative | 4387161 - 4387895 | 27579.9 |
| mechanosensitive ion channel family protein | PHEP_RS18340 | Not Available | Negative | 4387908 - 4389482 | 58514.2 |
| pyridoxine 5'-phosphate synthase | PHEP_RS18345 | Not Available | Positive | 4389507 - 4390229 | 26739.0 |
| hypothetical protein | PHEP_RS18350 | Not Available | Positive | 4390234 - 4390797 | 21314.8 |
| aminomethyl-transferring glycine dehydrogenase | PHEP_RS18355 | Not Available | Positive | 4390889 - 4393771 | 105349.0 |
| ycei family protein | PHEP_RS18360 | Not Available | Positive | 4393812 - 4394405 | 21200.0 |
| response regulator | PHEP_RS18365 | Not Available | Positive | 4394552 - 4394950 | 15284.8 |
| mbl fold metallo-hydrolase | PHEP_RS18370 | Not Available | Negative | 4394955 - 4395722 | 28878.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
