Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | PHEP_RS18275 | Not Available | Positive | 4377202 - 4378059 | 31075.9 |
| diadenylate cyclase cdaa | PHEP_RS18280 | Not Available | Positive | 4378088 - 4378879 | 29699.8 |
| hypothetical protein | PHEP_RS18285 | Not Available | Negative | 4379001 - 4379405 | 16001.6 |
| hypothetical protein | PHEP_RS22105 | Not Available | Negative | 4379440 - 4380006 | 22197.8 |
| hypothetical protein | PHEP_RS18295 | Not Available | Negative | 4380109 - 4380615 | 19704.8 |
| atp-binding protein | PHEP_RS18300 | Not Available | Negative | 4380806 - 4381210 | 15301.6 |
| brxa/brxb family bacilliredoxin | PHEP_RS18305 | Not Available | Negative | 4381309 - 4381719 | 14650.7 |
| bestrophin family protein | PHEP_RS18310 | Not Available | Negative | 4381846 - 4382775 | 35822.0 |
| hypothetical protein | PHEP_RS18315 | Not Available | Negative | 4382801 - 4383286 | 18353.3 |
| hamp domain-containing sensor histidine kinase | PHEP_RS18320 | Not Available | Negative | 4383401 - 4384780 | 51807.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
