Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS18025 | Not Available | Negative | 4319712 - 4320278 | 21821.9 |
| udp-glucose 4-epimerase gale | PHEP_RS18030 | Not Available | Negative | 4320279 - 4321301 | 37298.1 |
| udp-glucuronic acid decarboxylase family protein | PHEP_RS18035 | Not Available | Negative | 4321310 - 4322299 | 37143.5 |
| udp-glucose dehydrogenase family protein | PHEP_RS18040 | Not Available | Negative | 4322299 - 4323612 | 48273.1 |
| 3-deoxy-d-manno-octulosonic acid transferase | PHEP_RS18045 | Not Available | Positive | 4323769 - 4324998 | 46082.8 |
| ferrochelatase | PHEP_RS18050 | Not Available | Negative | 4324988 - 4326001 | 38062.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PHEP_RS18055 | Not Available | Negative | 4326113 - 4326961 | 31941.0 |
| hypothetical protein | PHEP_RS18060 | Not Available | Negative | 4327015 - 4327971 | 36035.2 |
| glycerol acyltransferase | PHEP_RS18065 | Not Available | Negative | 4327968 - 4328588 | 24320.4 |
| phosphoribosyltransferase family protein | PHEP_RS18070 | Not Available | Negative | 4328628 - 4329137 | 19273.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
