Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | PHEP_RS17975 | Not Available | Positive | 4310585 - 4311166 | 21326.5 |
| tpm domain-containing protein | PHEP_RS17980 | Not Available | Positive | 4311240 - 4311683 | 16045.2 |
| tpm domain-containing protein | PHEP_RS17985 | Not Available | Positive | 4311687 - 4312466 | 26401.7 |
| nudix hydrolase | PHEP_RS17990 | Not Available | Positive | 4312484 - 4313029 | 20632.8 |
| chromosomal replication initiator protein dnaa | PHEP_RS17995 | Not Available | Negative | 4313026 - 4314456 | 53896.1 |
| acyl-coa mutase large subunit family protein | PHEP_RS18000 | Not Available | Negative | 4314650 - 4316197 | 57056.9 |
| hypothetical protein | PHEP_RS18005 | Not Available | Negative | 4316200 - 4316730 | 20148.3 |
| hesb/isca family protein | PHEP_RS18010 | Not Available | Positive | 4316915 - 4317265 | 12689.0 |
| abc transporter permease | PHEP_RS18015 | Not Available | Positive | 4317371 - 4318603 | 44191.4 |
| dtdp-glucose 4,6-dehydratase | PHEP_RS18020 | Not Available | Negative | 4318644 - 4319696 | 39719.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
