Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 4298465 - 4298539 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4298716 - 4300237 | Not Available |
| fic family protein | PHEP_RS17935 | Not Available | Negative | 4300953 - 4302074 | 42643.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4302337 - 4302448 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4302588 - 4305466 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4305691 - 4305767 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4305786 - 4305860 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4306037 - 4307558 | Not Available |
| coa-binding protein | PHEP_RS17965 | Not Available | Negative | 4308461 - 4308820 | 13157.9 |
| nad(p)/fad-dependent oxidoreductase | PHEP_RS17970 | Not Available | Negative | 4308914 - 4310455 | 55665.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
