Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | PHEP_RS01755 | Not Available | Positive | 415059 - 416426 | 49457.6 |
| hypothetical protein | PHEP_RS01760 | Not Available | Positive | 416455 - 417846 | 50409.0 |
| degt/dnrj/eryc1/strs family aminotransferase | PHEP_RS01765 | Not Available | Positive | 417868 - 419280 | 51945.5 |
| neutral/alkaline non-lysosomal ceramidase n-terminal domain-containing protein | PHEP_RS01770 | Not Available | Positive | 419284 - 420672 | 50818.4 |
| amidohydrolase family protein | PHEP_RS01775 | Not Available | Positive | 420679 - 421686 | 37576.2 |
| hypothetical protein | PHEP_RS01780 | Not Available | Positive | 421726 - 423027 | 48401.1 |
| pvc-type heme-binding cxxch protein | PHEP_RS01785 | Not Available | Positive | 423031 - 425169 | 78879.8 |
| high-potential iron-sulfur protein | PHEP_RS21415 | Not Available | Positive | 425193 - 425609 | 14489.1 |
| n-acetylglucosamine-6-phosphate deacetylase | PHEP_RS01795 | Not Available | Positive | 425632 - 426822 | 43082.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PHEP_RS01800 | Not Available | Negative | 426833 - 427387 | 20849.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
