Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS17875 | Not Available | Negative | 4279997 - 4283407 | 127686.0 |
| hypothetical protein | PHEP_RS17880 | Not Available | Negative | 4283420 - 4285999 | 96957.4 |
| duf5017 domain-containing protein | PHEP_RS17885 | Not Available | Negative | 4285996 - 4286895 | 33155.1 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS17890 | Not Available | Negative | 4286913 - 4288484 | 59138.3 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS17895 | Not Available | Negative | 4288503 - 4291682 | 116299.0 |
| gntr family transcriptional regulator | PHEP_RS17900 | Not Available | Positive | 4291965 - 4292990 | 39837.4 |
| s8 family peptidase | PHEP_RS17905 | Not Available | Negative | 4293074 - 4294834 | 65644.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4295016 - 4295127 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4295267 - 4298145 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4298370 - 4298446 | Not Available |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
