Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | PHEP_RS17825 | Not Available | Positive | 4262803 - 4263528 | 27228.0 |
| sialidase family protein | PHEP_RS17830 | Not Available | Positive | 4263535 - 4264704 | 44059.6 |
| sialidase family protein | PHEP_RS17835 | Not Available | Positive | 4264676 - 4266427 | 65372.5 |
| phosphoenolpyruvate synthase | PHEP_RS17840 | Not Available | Negative | 4266437 - 4268875 | 90182.9 |
| arac family transcriptional regulator | PHEP_RS17845 | Not Available | Positive | 4269002 - 4269886 | 34171.4 |
| sodium:solute symporter family protein | PHEP_RS17850 | Not Available | Negative | 4269923 - 4271593 | 61120.5 |
| fad-dependent oxidoreductase | PHEP_RS17855 | Not Available | Negative | 4271596 - 4273890 | 85313.6 |
| hypothetical protein | PHEP_RS17860 | Not Available | Negative | 4273906 - 4276635 | 103431.0 |
| glycoside hydrolase family 97 protein | PHEP_RS17865 | Not Available | Negative | 4276760 - 4278586 | 68052.1 |
| sgnh/gdsl hydrolase family protein | PHEP_RS17870 | Not Available | Negative | 4278649 - 4280010 | 49879.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
