Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| start-like domain-containing protein | PHEP_RS17725 | Not Available | Negative | 4241320 - 4241700 | 14893.5 |
| Trna-met | Not Available | Not Available | Positive | 4241805 - 4241878 | Not Available |
| aldo/keto reductase | PHEP_RS17735 | Not Available | Negative | 4242162 - 4243040 | 32625.0 |
| aspartate aminotransferase family protein | PHEP_RS17740 | Not Available | Negative | 4243053 - 4244360 | 48534.3 |
| spinster family mfs transporter | PHEP_RS17745 | Not Available | Negative | 4244394 - 4245662 | 46183.0 |
| sdr family oxidoreductase | PHEP_RS17750 | Not Available | Negative | 4245690 - 4246478 | 28481.3 |
| aldo/keto reductase | PHEP_RS17755 | Not Available | Negative | 4246491 - 4247432 | 34533.0 |
| hypothetical protein | PHEP_RS17760 | Not Available | Negative | 4247443 - 4248471 | 37422.0 |
| smp-30/gluconolactonase/lre family protein | PHEP_RS17765 | Not Available | Negative | 4248538 - 4249344 | 29424.4 |
| m81 family metallopeptidase | PHEP_RS17770 | Not Available | Negative | 4249364 - 4250830 | 53620.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
