Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | PHEP_RS17570 | Not Available | Negative | 4201171 - 4201974 | 29588.0 |
| nadph-dependent fmn reductase | PHEP_RS17575 | Not Available | Positive | 4202158 - 4202679 | 19438.3 |
| hypothetical protein | PHEP_RS17580 | Not Available | Negative | 4202666 - 4203124 | 17272.9 |
| abc transporter substrate-binding protein | PHEP_RS17585 | Not Available | Positive | 4203143 - 4204804 | 63303.3 |
| tonb-dependent receptor domain-containing protein | PHEP_RS17590 | Not Available | Negative | 4204809 - 4207247 | 88884.4 |
| lta synthase family protein | PHEP_RS17595 | Not Available | Negative | 4207326 - 4209278 | 73912.4 |
| leucine--trna ligase | PHEP_RS17600 | Not Available | Negative | 4209456 - 4212266 | 107058.0 |
| chloride channel protein | PHEP_RS17605 | Not Available | Negative | 4212354 - 4213601 | 43868.9 |
| lipocalin family protein | PHEP_RS17610 | Not Available | Negative | 4213669 - 4214076 | 14891.7 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | PHEP_RS17615 | Not Available | Negative | 4214200 - 4215429 | 45522.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
