Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | PHEP_RS21945 | Not Available | Positive | 4192087 - 4192269 | 6984.71 |
| duf4295 domain-containing protein | PHEP_RS21950 | Not Available | Positive | 4192306 - 4192464 | 5692.0 |
| signal recognition particle-docking protein ftsy | PHEP_RS17530 | Not Available | Positive | 4192537 - 4193499 | 34813.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | PHEP_RS17535 | Not Available | Positive | 4193524 - 4194858 | 50345.4 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | PHEP_RS17540 | Not Available | Positive | 4194905 - 4196491 | 60342.2 |
| ldh family oxidoreductase | PHEP_RS17545 | Not Available | Positive | 4196497 - 4197582 | 38662.3 |
| signal peptidase i | PHEP_RS17550 | Not Available | Negative | 4197585 - 4198781 | 46247.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | PHEP_RS17555 | Not Available | Negative | 4198788 - 4199528 | 27549.8 |
| duf5683 domain-containing protein | PHEP_RS17560 | Not Available | Negative | 4199584 - 4200237 | 24055.2 |
| parb/repb/spo0j family partition protein | PHEP_RS17565 | Not Available | Negative | 4200237 - 4201160 | 34639.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
