Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fggy-family carbohydrate kinase | PHEP_RS17430 | Not Available | Negative | 4169950 - 4171404 | 52320.2 |
| fggy-family carbohydrate kinase | PHEP_RS17435 | Not Available | Negative | 4171407 - 4172855 | 53834.2 |
| 2-hydroxyacid dehydrogenase | PHEP_RS17440 | Not Available | Negative | 4172884 - 4173843 | 35718.8 |
| mfs transporter | PHEP_RS17445 | Not Available | Negative | 4173893 - 4175179 | 46359.2 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS17450 | Not Available | Positive | 4175458 - 4176222 | 27853.1 |
| response regulator transcription factor | PHEP_RS17455 | Not Available | Negative | 4176302 - 4176661 | 13517.3 |
| alpha/beta fold hydrolase | PHEP_RS17460 | Not Available | Negative | 4176721 - 4178037 | 48125.3 |
| Trna-ala | Not Available | Not Available | Positive | 4178183 - 4178256 | Not Available |
| na+/h+ antiporter | PHEP_RS17470 | Not Available | Positive | 4178393 - 4179997 | 60071.0 |
| acyl-coa thioesterase | PHEP_RS17475 | Not Available | Positive | 4180010 - 4180579 | 20962.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
