Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bama/tama family outer membrane protein | PHEP_RS17280 | Not Available | Positive | 4131001 - 4133325 | 87341.3 |
| yihy/virulence factor brkb family protein | PHEP_RS17285 | Not Available | Positive | 4133333 - 4134307 | 35437.5 |
| atp-binding protein | PHEP_RS21745 | Not Available | Negative | 4134308 - 4136320 | 76109.0 |
| dna topoisomerase iv subunit b | PHEP_RS17295 | Not Available | Negative | 4136552 - 4138453 | 72066.5 |
| dead/deah box helicase | PHEP_RS17300 | Not Available | Positive | 4138693 - 4140006 | 48417.0 |
| had family hydrolase | PHEP_RS17305 | Not Available | Positive | 4140061 - 4140675 | 23577.3 |
| class i fructose-bisphosphate aldolase | PHEP_RS17310 | Not Available | Positive | 4140684 - 4141721 | 38106.1 |
| mfs transporter | PHEP_RS17320 | Not Available | Positive | 4142180 - 4143385 | 44773.4 |
| ompa/motb family protein | PHEP_RS17325 | Not Available | Negative | 4143439 - 4144299 | 31733.7 |
| bon domain-containing protein | PHEP_RS17330 | Not Available | Positive | 4144463 - 4144960 | 17053.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
