Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PHEP_RS17230 | Not Available | Positive | 4114155 - 4114907 | 28200.1 |
| class i sam-dependent methyltransferase | PHEP_RS17235 | Not Available | Positive | 4114924 - 4115805 | 33438.2 |
| hypothetical protein | PHEP_RS17240 | Not Available | Positive | 4115911 - 4116966 | 39380.1 |
| hypothetical protein | PHEP_RS17245 | Not Available | Negative | 4117015 - 4118670 | 60659.0 |
| voc family protein | PHEP_RS17250 | Not Available | Negative | 4118766 - 4119116 | 13080.7 |
| duf6702 family protein | PHEP_RS17255 | Not Available | Negative | 4119191 - 4119676 | 18774.6 |
| hupe/urej family protein | PHEP_RS17260 | Not Available | Positive | 4119740 - 4120327 | 22198.0 |
| m1 family metallopeptidase | PHEP_RS17265 | Not Available | Positive | 4120351 - 4122687 | 89881.2 |
| dna gyrase/topoisomerase iv subunit a | PHEP_RS17270 | Not Available | Negative | 4122690 - 4125623 | 109518.0 |
| translocation/assembly module tamb domain-containing protein | PHEP_RS17275 | Not Available | Positive | 4125879 - 4131017 | 189915.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
