Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | PHEP_RS17180 | Not Available | Positive | 4105084 - 4105905 | 30474.3 |
| mfs transporter | PHEP_RS17185 | Not Available | Negative | 4105895 - 4107157 | 45461.7 |
| hypothetical protein | PHEP_RS17190 | Not Available | Negative | 4107204 - 4107428 | 8792.67 |
| tetr/acrr family transcriptional regulator | PHEP_RS17195 | Not Available | Negative | 4107464 - 4108054 | 22886.9 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PHEP_RS17200 | Not Available | Negative | 4108263 - 4110197 | 71629.2 |
| rdd family protein | PHEP_RS17205 | Not Available | Negative | 4110259 - 4110876 | 23520.7 |
| liaf transmembrane domain-containing protein | PHEP_RS17210 | Not Available | Negative | 4110877 - 4111812 | 34190.2 |
| pspc domain-containing protein | PHEP_RS21740 | Not Available | Negative | 4111815 - 4112549 | 27403.4 |
| sdr family oxidoreductase | PHEP_RS17220 | Not Available | Negative | 4112572 - 4113261 | 24930.0 |
| mlae family abc transporter permease | PHEP_RS17225 | Not Available | Positive | 4113424 - 4114158 | 26130.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
