Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | PHEP_RS17035 | Not Available | Positive | 4075286 - 4076767 | 54171.4 |
| atp-binding cassette domain-containing protein | PHEP_RS17040 | Not Available | Positive | 4076775 - 4078268 | 55716.6 |
| 2-isopropylmalate synthase | PHEP_RS17045 | Not Available | Positive | 4078249 - 4079412 | 42639.9 |
| 3-isopropylmalate dehydratase large subunit | PHEP_RS17050 | Not Available | Positive | 4079454 - 4080866 | 50619.5 |
| 3-isopropylmalate dehydratase small subunit | PHEP_RS17055 | Not Available | Positive | 4080885 - 4081481 | 22366.5 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | PHEP_RS17060 | Not Available | Positive | 4081499 - 4083016 | 56069.9 |
| 3-isopropylmalate dehydrogenase | PHEP_RS17065 | Not Available | Positive | 4083076 - 4084134 | 38404.0 |
| threonine ammonia-lyase ilva | PHEP_RS17070 | Not Available | Positive | 4084238 - 4085482 | 45333.9 |
| hypothetical protein | PHEP_RS17075 | Not Available | Positive | 4085598 - 4086017 | 15561.4 |
| hypothetical protein | PHEP_RS17080 | Not Available | Negative | 4086139 - 4086411 | 10201.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
