Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PHEP_RS16985 | Not Available | Positive | 4063794 - 4065809 | 75878.1 |
| Trna-arg | Not Available | Not Available | Positive | 4065983 - 4066059 | Not Available |
| sdr family oxidoreductase | PHEP_RS16995 | Not Available | Negative | 4066367 - 4067278 | 33440.2 |
| f0f1 atp synthase subunit beta | PHEP_RS17000 | Not Available | Positive | 4067497 - 4068999 | 54213.1 |
| atp synthase f1 subunit epsilon | PHEP_RS17005 | Not Available | Positive | 4069010 - 4069252 | 8492.53 |
| branched-chain amino acid transaminase | PHEP_RS17010 | Not Available | Positive | 4069775 - 4070665 | 33360.1 |
| dihydroxy-acid dehydratase | PHEP_RS17015 | Not Available | Positive | 4070683 - 4072380 | 60060.4 |
| biosynthetic-type acetolactate synthase large subunit | PHEP_RS17020 | Not Available | Positive | 4072414 - 4074153 | 63406.4 |
| acetolactate synthase small subunit | PHEP_RS17025 | Not Available | Positive | 4074161 - 4074778 | 24234.0 |
| dinb family protein | PHEP_RS17030 | Not Available | Positive | 4074788 - 4075255 | 17886.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
