Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bt_3987 domain-containing protein | PHEP_RS16940 | Not Available | Negative | 4051749 - 4052957 | 43508.6 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS16945 | Not Available | Negative | 4052978 - 4054780 | 68282.8 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS16950 | Not Available | Negative | 4054805 - 4057861 | 113197.0 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS16955 | Not Available | Positive | 4058208 - 4058957 | 27720.9 |
| lytr/algr family response regulator transcription factor | PHEP_RS16960 | Not Available | Negative | 4059341 - 4060063 | 27244.9 |
| ompa family protein | PHEP_RS16965 | Not Available | Negative | 4060148 - 4061179 | 37636.0 |
| hypothetical protein | PHEP_RS16970 | Not Available | Negative | 4061385 - 4062068 | 25174.2 |
| hypothetical protein | PHEP_RS22265 | Not Available | Negative | 4062100 - 4062237 | 4917.08 |
| hypothetical protein | PHEP_RS16975 | Not Available | Negative | 4062251 - 4062805 | 20343.2 |
| hypothetical protein | PHEP_RS16980 | Not Available | Negative | 4062851 - 4063600 | 26796.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
