Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pvc-type heme-binding cxxch protein | PHEP_RS01655 | Not Available | Positive | 387521 - 389638 | 78076.8 |
| high-potential iron-sulfur protein | PHEP_RS01660 | Not Available | Positive | 389665 - 390099 | 15444.6 |
| rida family protein | PHEP_RS01665 | Not Available | Positive | 390117 - 391346 | 43639.8 |
| plastocyanin/azurin family copper-binding protein | PHEP_RS01670 | Not Available | Positive | 391337 - 392485 | 43167.2 |
| pqq-dependent sugar dehydrogenase | PHEP_RS01675 | Not Available | Positive | 392490 - 393998 | 55741.9 |
| amidohydrolase family protein | PHEP_RS01680 | Not Available | Positive | 393995 - 394921 | 34726.8 |
| amidohydrolase family protein | PHEP_RS01685 | Not Available | Positive | 394937 - 395872 | 35302.3 |
| amidohydrolase family protein | PHEP_RS01690 | Not Available | Positive | 395889 - 396863 | 36430.9 |
| amidohydrolase family protein | PHEP_RS01695 | Not Available | Positive | 396853 - 397659 | 30613.9 |
| hypothetical protein | PHEP_RS01700 | Not Available | Positive | 397711 - 399855 | 81348.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
