Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tcr/tet family mfs transporter | PHEP_RS16890 | Not Available | Positive | 4037359 - 4038585 | 44238.8 |
| family 43 glycosylhydrolase | PHEP_RS16895 | Not Available | Negative | 4038620 - 4039687 | 39846.0 |
| n-acetylglucosamine kinase | PHEP_RS16900 | Not Available | Negative | 4039684 - 4040523 | 31235.0 |
| sugar mfs transporter | PHEP_RS16905 | Not Available | Negative | 4040535 - 4041794 | 45183.7 |
| hypothetical protein | PHEP_RS16910 | Not Available | Negative | 4041796 - 4043448 | 60925.7 |
| beta-n-acetylhexosaminidase | PHEP_RS16915 | Not Available | Negative | 4043459 - 4045300 | 69633.0 |
| n-acetylmuramic acid 6-phosphate etherase | PHEP_RS16920 | Not Available | Negative | 4045315 - 4046133 | 29267.6 |
| alpha-n-acetylglucosaminidase | PHEP_RS16925 | Not Available | Negative | 4046153 - 4048402 | 87328.6 |
| alpha-n-acetylglucosaminidase | PHEP_RS16930 | Not Available | Negative | 4048409 - 4050646 | 86045.7 |
| family 43 glycosylhydrolase | PHEP_RS16935 | Not Available | Negative | 4050670 - 4051743 | 39207.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
