Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | PHEP_RS16835 | Not Available | Positive | 4022410 - 4025910 | 129495.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS16840 | Not Available | Positive | 4025928 - 4027475 | 57503.7 |
| tlpa disulfide reductase family protein | PHEP_RS16845 | Not Available | Positive | 4027484 - 4028008 | 19605.3 |
| calcium:proton antiporter | PHEP_RS16850 | Not Available | Negative | 4028068 - 4029150 | 37739.0 |
| hypothetical protein | PHEP_RS16860 | Not Available | Positive | 4029273 - 4029689 | 14914.0 |
| ycei family protein | PHEP_RS16865 | Not Available | Positive | 4029768 - 4030349 | 20931.9 |
| sulfatase | PHEP_RS16870 | Not Available | Negative | 4030364 - 4031905 | 57785.6 |
| fecr family protein | PHEP_RS21735 | Not Available | Positive | 4032158 - 4033432 | 47145.8 |
| mechanosensitive ion channel domain-containing protein | PHEP_RS16880 | Not Available | Negative | 4033446 - 4035917 | 91745.9 |
| mfs transporter | PHEP_RS16885 | Not Available | Positive | 4036012 - 4037304 | 47893.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
