Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | PHEP_RS16580 | Not Available | Negative | 3954821 - 3955726 | 33659.4 |
| division/cell wall cluster transcriptional repressor mraz | PHEP_RS16585 | Not Available | Negative | 3955716 - 3956189 | 17828.5 |
| phosphoglycerate kinase | PHEP_RS16590 | Not Available | Negative | 3956391 - 3957584 | 42981.8 |
| gnat family n-acetyltransferase | PHEP_RS16595 | Not Available | Negative | 3957630 - 3958061 | 15820.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | PHEP_RS16600 | Not Available | Negative | 3958054 - 3959049 | 35925.0 |
| exosortase/archaeosortase family protein | PHEP_RS22455 | Not Available | Positive | 3959391 - 3959735 | 13198.5 |
| m1 family metallopeptidase | PHEP_RS16610 | Not Available | Negative | 3959737 - 3961317 | 59888.7 |
| response regulator | PHEP_RS16615 | Not Available | Negative | 3961422 - 3961817 | 14703.8 |
| hypothetical protein | PHEP_RS16620 | Not Available | Positive | 3962038 - 3962241 | 7709.51 |
| aaa domain-containing protein | PHEP_RS16625 | Not Available | Negative | 3962238 - 3964148 | 71124.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
