Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsa | PHEP_RS16530 | Not Available | Negative | 3942296 - 3943657 | 49541.1 |
| cell division protein ftsq/divib | PHEP_RS16535 | Not Available | Negative | 3943685 - 3944629 | 35754.6 |
| udp-n-acetylmuramate--l-alanine ligase | PHEP_RS16540 | Not Available | Negative | 3944622 - 3945977 | 49781.3 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | PHEP_RS16545 | Not Available | Negative | 3945977 - 3947092 | 39834.1 |
| ftsw/roda/spove family cell cycle protein | PHEP_RS16550 | Not Available | Negative | 3947103 - 3948269 | 42400.5 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | PHEP_RS16555 | Not Available | Negative | 3948273 - 3949616 | 49693.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PHEP_RS16560 | Not Available | Negative | 3949616 - 3950863 | 46559.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PHEP_RS16565 | Not Available | Negative | 3950863 - 3952320 | 52958.6 |
| penicillin-binding protein | PHEP_RS16570 | Not Available | Negative | 3952322 - 3954415 | 76759.7 |
| ftsl-like putative cell division protein | PHEP_RS16575 | Not Available | Negative | 3954405 - 3954824 | 16311.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
