Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | PHEP_RS16480 | Not Available | Positive | 3931582 - 3932565 | 36826.9 |
| res family nad+ phosphorylase | PHEP_RS16485 | Not Available | Negative | 3932585 - 3933037 | 16669.4 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | PHEP_RS16490 | Not Available | Negative | 3933037 - 3933516 | 17524.2 |
| tyrosine--trna ligase | PHEP_RS16495 | Not Available | Negative | 3933616 - 3934902 | 48009.3 |
| acp phosphodiesterase | PHEP_RS16500 | Not Available | Positive | 3935006 - 3935680 | 26363.6 |
| nad-dependent dna ligase liga | PHEP_RS16505 | Not Available | Positive | 3935733 - 3937745 | 75729.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PHEP_RS16510 | Not Available | Positive | 3937756 - 3938637 | 31573.9 |
| hypothetical protein | PHEP_RS16515 | Not Available | Negative | 3938690 - 3938866 | 6497.81 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PHEP_RS16520 | Not Available | Negative | 3939126 - 3940367 | 46073.7 |
| cell division protein ftsz | PHEP_RS16525 | Not Available | Negative | 3940532 - 3942166 | 59475.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
