Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PHEP_RS16430 | Not Available | Negative | 3913626 - 3914381 | 28589.1 |
| rna polymerase sigma factor | PHEP_RS16435 | Not Available | Negative | 3914378 - 3914947 | 21812.1 |
| hypothetical protein | PHEP_RS16440 | Not Available | Positive | 3915125 - 3916114 | 35327.6 |
| pkd domain-containing protein | PHEP_RS16445 | Not Available | Positive | 3916280 - 3918364 | 77807.7 |
| chat domain-containing protein | PHEP_RS16450 | Not Available | Positive | 3918398 - 3921127 | 103960.0 |
| 1,4-alpha-glucan branching protein glgb | PHEP_RS16455 | Not Available | Negative | 3921111 - 3923021 | 73744.9 |
| glycoside hydrolase family 31 protein | PHEP_RS16460 | Not Available | Negative | 3923021 - 3925486 | 95734.3 |
| tonb-dependent receptor | PHEP_RS16465 | Not Available | Negative | 3925651 - 3928575 | 106418.0 |
| penicillin acylase family protein | PHEP_RS16470 | Not Available | Positive | 3928764 - 3931199 | 91912.8 |
| hypothetical protein | PHEP_RS16475 | Not Available | Positive | 3931204 - 3931554 | 12795.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
