Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS01605 | Not Available | Positive | 372667 - 372921 | 9163.4 |
| duf983 domain-containing protein | PHEP_RS01610 | Not Available | Positive | 372905 - 373303 | 15156.5 |
| duf2461 domain-containing protein | PHEP_RS01615 | Not Available | Positive | 373300 - 373962 | 25554.6 |
| ompa/motb family protein | PHEP_RS01620 | Not Available | Positive | 373983 - 374825 | 31478.2 |
| sigma-70 family rna polymerase sigma factor | PHEP_RS01625 | Not Available | Positive | 374935 - 375513 | 22423.5 |
| fecr family protein | PHEP_RS01630 | Not Available | Positive | 375594 - 376760 | 43617.1 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS01635 | Not Available | Positive | 376941 - 380258 | 120078.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS01640 | Not Available | Positive | 380288 - 381889 | 58911.6 |
| fg-gap repeat domain-containing protein | PHEP_RS01645 | Not Available | Positive | 381914 - 384112 | 78780.2 |
| heparinase ii/iii domain-containing protein | PHEP_RS01650 | Not Available | Positive | 384334 - 387351 | 111911.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
