Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | PHEP_RS16380 | Not Available | Positive | 3905199 - 3906185 | 35365.7 |
| hypothetical protein | PHEP_RS16385 | Not Available | Positive | 3906187 - 3907029 | 31805.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | PHEP_RS16390 | Not Available | Positive | 3907039 - 3908040 | 35780.8 |
| hypothetical protein | PHEP_RS16395 | Not Available | Positive | 3908207 - 3909010 | 29870.3 |
| pr6pr family membrane protein | PHEP_RS16400 | Not Available | Negative | 3909022 - 3909684 | 25281.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PHEP_RS16405 | Not Available | Negative | 3909801 - 3910265 | 15570.5 |
| duf5777 family beta-barrel protein | PHEP_RS16410 | Not Available | Negative | 3910283 - 3911221 | 35455.6 |
| ycei family protein | PHEP_RS16415 | Not Available | Negative | 3911234 - 3911794 | 20831.5 |
| outer membrane beta-barrel protein | PHEP_RS16420 | Not Available | Negative | 3911769 - 3912929 | 43014.7 |
| rna polymerase sigma factor | PHEP_RS16425 | Not Available | Negative | 3912953 - 3913489 | 21350.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
