Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | PHEP_RS16230 | Not Available | Negative | 3874187 - 3874678 | 17682.4 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | PHEP_RS16235 | Not Available | Negative | 3874733 - 3875479 | 27274.9 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | PHEP_RS16240 | Not Available | Negative | 3875491 - 3877407 | 71419.8 |
| succinate dehydrogenase cytochrome b subunit | PHEP_RS16245 | Not Available | Negative | 3877409 - 3878083 | 26263.6 |
| anion permease | PHEP_RS16250 | Not Available | Negative | 3878093 - 3879523 | 52096.5 |
| porin | PHEP_RS16255 | Not Available | Negative | 3879553 - 3880662 | 42269.8 |
| duf1772 domain-containing protein | PHEP_RS16260 | Not Available | Positive | 3881076 - 3881555 | 17807.3 |
| hypothetical protein | PHEP_RS16265 | Not Available | Positive | 3881629 - 3881970 | 13213.0 |
| cap domain-containing protein | PHEP_RS16270 | Not Available | Positive | 3882031 - 3882717 | 26214.5 |
| lta synthase family protein | PHEP_RS16275 | Not Available | Positive | 3882807 - 3884735 | 74035.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
