Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl-type esterase/lipase family protein | PHEP_RS16180 | Not Available | Negative | 3857504 - 3859573 | 77793.9 |
| sialidase family protein | PHEP_RS16185 | Not Available | Negative | 3859580 - 3861151 | 57882.2 |
| mfs transporter | PHEP_RS16190 | Not Available | Negative | 3861162 - 3862412 | 45412.3 |
| kelch repeat-containing protein | PHEP_RS16195 | Not Available | Negative | 3862434 - 3863555 | 40678.5 |
| dihydrodipicolinate synthase family protein | PHEP_RS16200 | Not Available | Negative | 3863591 - 3864529 | 34405.7 |
| susd family outer membrane lipoprotein nanu | PHEP_RS16205 | Not Available | Negative | 3864616 - 3866184 | 58247.2 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS16210 | Not Available | Negative | 3866206 - 3869505 | 119388.0 |
| fadr/gntr family transcriptional regulator | PHEP_RS16215 | Not Available | Positive | 3869680 - 3870381 | 26757.7 |
| gfo/idh/moca family protein | PHEP_RS16220 | Not Available | Negative | 3870385 - 3871734 | 49965.5 |
| catalase | PHEP_RS16225 | Not Available | Negative | 3872026 - 3874182 | 79424.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
