Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS16130 | Not Available | Negative | 3847573 - 3848529 | 35948.2 |
| response regulator transcription factor | PHEP_RS16135 | Not Available | Negative | 3848649 - 3849440 | 30858.7 |
| hypothetical protein | PHEP_RS16140 | Not Available | Positive | 3849711 - 3849983 | 9712.02 |
| duf3575 domain-containing protein | PHEP_RS16145 | Not Available | Positive | 3850016 - 3850819 | 29313.1 |
| hypothetical protein | PHEP_RS16150 | Not Available | Positive | 3850837 - 3851253 | 15576.4 |
| hypothetical protein | PHEP_RS16155 | Not Available | Negative | 3851328 - 3851843 | 17815.1 |
| atp-binding cassette domain-containing protein | PHEP_RS16160 | Not Available | Negative | 3851996 - 3852703 | 26011.8 |
| glycine--trna ligase | PHEP_RS16165 | Not Available | Positive | 3852808 - 3854295 | 57610.5 |
| beta-n-acetylhexosaminidase | PHEP_RS16170 | Not Available | Negative | 3854327 - 3856282 | 74420.8 |
| age family epimerase/isomerase | PHEP_RS16175 | Not Available | Negative | 3856289 - 3857500 | 47124.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
