Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc dependent phospholipase c family protein | PHEP_RS16080 | Not Available | Positive | 3838592 - 3839449 | 33241.9 |
| deda family protein | PHEP_RS16085 | Not Available | Negative | 3839458 - 3840150 | 25982.5 |
| duf4397 domain-containing protein | PHEP_RS16090 | Not Available | Negative | 3840248 - 3840937 | 23622.9 |
| dna polymerase iii subunit beta | PHEP_RS16095 | Not Available | Negative | 3841018 - 3842142 | 41276.3 |
| gliding motility-associated abc transporter substrate-binding protein gldg | PHEP_RS16100 | Not Available | Negative | 3842178 - 3843857 | 62318.7 |
| gliding motility-associated abc transporter permease subunit gldf | PHEP_RS16105 | Not Available | Negative | 3843851 - 3844579 | 27017.5 |
| hypothetical protein | PHEP_RS16110 | Not Available | Negative | 3844591 - 3845109 | 18405.1 |
| hypothetical protein | PHEP_RS16115 | Not Available | Positive | 3845350 - 3845805 | 17555.8 |
| alpha/beta fold hydrolase | PHEP_RS16120 | Not Available | Positive | 3845925 - 3846749 | 29889.5 |
| response regulator transcription factor | PHEP_RS22445 | Not Available | Negative | 3846772 - 3847563 | 30450.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
