Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmb | PHEP_RS16030 | Not Available | Negative | 3828979 - 3829641 | 24522.9 |
| polysaccharide lyase 6 family protein | PHEP_RS16035 | Not Available | Negative | 3829722 - 3831110 | 49695.9 |
| duf421 domain-containing protein | PHEP_RS16040 | Not Available | Positive | 3831194 - 3831709 | 19219.8 |
| hypothetical protein | PHEP_RS16045 | Not Available | Negative | 3831718 - 3832131 | 14859.9 |
| gliding motility protein gldc | PHEP_RS16050 | Not Available | Negative | 3832134 - 3832469 | 12981.4 |
| hypothetical protein | PHEP_RS16055 | Not Available | Negative | 3832475 - 3832789 | 12016.5 |
| dead/deah box helicase | PHEP_RS16060 | Not Available | Negative | 3832753 - 3834087 | 49803.7 |
| dihydroorotase | PHEP_RS16065 | Not Available | Positive | 3834190 - 3835524 | 49282.2 |
| duf3810 domain-containing protein | PHEP_RS16070 | Not Available | Positive | 3835524 - 3836609 | 42374.6 |
| fe-s protein assembly chaperone hsca | PHEP_RS16075 | Not Available | Positive | 3836666 - 3838552 | 68617.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
