Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS15980 | Not Available | Negative | 3820829 - 3821236 | 14865.1 |
| kdsc family phosphatase | PHEP_RS15985 | Not Available | Negative | 3821349 - 3821903 | 20349.8 |
| fe-s cluster assembly protein iscx | PHEP_RS15990 | Not Available | Negative | 3821882 - 3822124 | 9800.28 |
| 2fe-2s iron-sulfur cluster-binding protein | PHEP_RS15995 | Not Available | Negative | 3822151 - 3822483 | 12098.4 |
| rossmann-like and duf2520 domain-containing protein | PHEP_RS16000 | Not Available | Negative | 3822526 - 3823284 | 27786.8 |
| heme lyase ccmf/nrfe family subunit | PHEP_RS16005 | Not Available | Negative | 3823323 - 3825788 | 92847.5 |
| cytochrome c maturation protein ccme | PHEP_RS16010 | Not Available | Negative | 3825794 - 3826204 | 15587.7 |
| glu/leu/phe/val family dehydrogenase | PHEP_RS16015 | Not Available | Negative | 3826439 - 3827860 | 51786.3 |
| ccmd family protein | PHEP_RS16020 | Not Available | Negative | 3828011 - 3828229 | 8192.43 |
| cytochrome c biogenesis protein ccsa | PHEP_RS16025 | Not Available | Negative | 3828231 - 3828890 | 25309.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
