Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | PHEP_RS15930 | Not Available | Positive | 3812488 - 3812943 | 16406.7 |
| 4fe-4s dicluster domain-containing protein | PHEP_RS15935 | Not Available | Negative | 3813016 - 3813366 | 12734.6 |
| acyl-coa reductase | PHEP_RS15940 | Not Available | Positive | 3813443 - 3814462 | 38627.4 |
| gliding motility-associated c-terminal domain-containing protein | PHEP_RS15945 | Not Available | Positive | 3814537 - 3816420 | 67301.2 |
| hypothetical protein | PHEP_RS15950 | Not Available | Positive | 3816468 - 3816671 | 7760.67 |
| cell division atp-binding protein ftse | PHEP_RS15955 | Not Available | Positive | 3816674 - 3817357 | 25283.9 |
| nucleotide exchange factor grpe | PHEP_RS15960 | Not Available | Positive | 3817528 - 3818100 | 21116.8 |
| molecular chaperone dnaj | PHEP_RS15965 | Not Available | Positive | 3818108 - 3819265 | 41459.2 |
| hypothetical protein | PHEP_RS15970 | Not Available | Positive | 3819265 - 3820182 | 33008.5 |
| maf family nucleotide pyrophosphatase | PHEP_RS15975 | Not Available | Negative | 3820168 - 3820737 | 20940.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
