Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | PHEP_RS01555 | Not Available | Positive | 364959 - 365897 | 35553.8 |
| helix-turn-helix domain-containing protein | PHEP_RS01560 | Not Available | Positive | 365913 - 366848 | 35560.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | PHEP_RS01565 | Not Available | Negative | 367087 - 367842 | 28048.7 |
| 2og-fe(ii) oxygenase | PHEP_RS01570 | Not Available | Negative | 367891 - 368319 | 16791.4 |
| duf1349 domain-containing protein | PHEP_RS01575 | Not Available | Negative | 368348 - 369049 | 26359.1 |
| ester cyclase | PHEP_RS01580 | Not Available | Negative | 369169 - 369630 | 16922.1 |
| dna-3-methyladenine glycosylase family protein | PHEP_RS01585 | Not Available | Positive | 369801 - 370706 | 34707.2 |
| 2og-fe(ii) oxygenase | PHEP_RS01590 | Not Available | Negative | 370770 - 371483 | 27393.9 |
| nuclear transport factor 2 family protein | PHEP_RS01595 | Not Available | Negative | 371575 - 371766 | 7165.7 |
| heat repeat domain-containing protein | PHEP_RS01600 | Not Available | Positive | 371836 - 372591 | 29081.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
