Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6266 family protein | PHEP_RS21725 | Not Available | Positive | 3757691 - 3758320 | 23238.1 |
| duf6266 family protein | PHEP_RS15680 | Not Available | Positive | 3758331 - 3758969 | 23712.8 |
| nad(p)/fad-dependent oxidoreductase | PHEP_RS15685 | Not Available | Negative | 3759015 - 3759917 | 32896.4 |
| tetr/acrr family transcriptional regulator | PHEP_RS15690 | Not Available | Negative | 3759968 - 3760549 | 22020.3 |
| panacea domain-containing protein | PHEP_RS15695 | Not Available | Positive | 3760712 - 3761272 | 21007.7 |
| lipocalin family protein | PHEP_RS15705 | Not Available | Positive | 3761960 - 3762442 | 17993.2 |
| lytr/algr family response regulator transcription factor | PHEP_RS15710 | Not Available | Negative | 3762439 - 3763167 | 27913.8 |
| sensor histidine kinase | PHEP_RS15715 | Not Available | Positive | 3763250 - 3764302 | 39886.8 |
| hypothetical protein | PHEP_RS15720 | Not Available | Positive | 3764424 - 3765236 | 30504.8 |
| homoserine o-acetyltransferase meta | PHEP_RS15725 | Not Available | Positive | 3765401 - 3766339 | 36098.0 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
