Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1016 n-terminal domain-containing protein | PHEP_RS15625 | Not Available | Positive | 3750721 - 3751047 | 12955.6 |
| peptidylprolyl isomerase | PHEP_RS15630 | Not Available | Positive | 3751107 - 3751781 | 25892.3 |
| rna polymerase sigma factor | PHEP_RS15635 | Not Available | Positive | 3751957 - 3752523 | 21761.2 |
| upf0175 family protein | PHEP_RS15640 | Not Available | Negative | 3752537 - 3752848 | 11838.3 |
| acr3 family arsenite efflux transporter | PHEP_RS15645 | Not Available | Negative | 3752886 - 3753950 | 38787.8 |
| arsenate reductase arsc | PHEP_RS15650 | Not Available | Negative | 3753952 - 3754371 | 15727.5 |
| duf6428 family protein | PHEP_RS15655 | Not Available | Negative | 3754400 - 3754969 | 20826.8 |
| arsr/smtb family transcription factor | PHEP_RS15660 | Not Available | Negative | 3755009 - 3755338 | 11826.5 |
| fecr family protein | PHEP_RS15665 | Not Available | Positive | 3755523 - 3756692 | 43092.1 |
| duf6266 family protein | PHEP_RS15670 | Not Available | Positive | 3756983 - 3757648 | 24159.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
