Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | PHEP_RS15575 | Not Available | Positive | 3740109 - 3740915 | 30636.8 |
| sterol desaturase family protein | PHEP_RS15580 | Not Available | Positive | 3741244 - 3742467 | 47913.1 |
| had family hydrolase | PHEP_RS15585 | Not Available | Positive | 3742488 - 3743147 | 24234.9 |
| hypothetical protein | PHEP_RS15590 | Not Available | Positive | 3743163 - 3743426 | 10122.9 |
| acyltransferase family protein | PHEP_RS15595 | Not Available | Positive | 3743423 - 3744508 | 40877.3 |
| nadp-dependent oxidoreductase | PHEP_RS15600 | Not Available | Negative | 3744505 - 3745437 | 33202.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | PHEP_RS15605 | Not Available | Negative | 3745512 - 3747818 | 86817.1 |
| lrp/asnc family transcriptional regulator | PHEP_RS15610 | Not Available | Positive | 3748040 - 3748501 | 17660.3 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS15615 | Not Available | Negative | 3748609 - 3749478 | 31891.6 |
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS15620 | Not Available | Negative | 3749557 - 3750384 | 31947.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
