Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | PHEP_RS15480 | Not Available | Negative | 3721279 - 3722853 | 56440.5 |
| sugar mfs transporter | PHEP_RS15485 | Not Available | Negative | 3722846 - 3724138 | 46631.4 |
| hypothetical protein | PHEP_RS22450 | Not Available | Negative | 3724141 - 3724380 | 8915.29 |
| n-acetylmuramic acid 6-phosphate etherase | PHEP_RS15490 | Not Available | Negative | 3724388 - 3724957 | 20040.9 |
| mfs transporter | PHEP_RS15495 | Not Available | Negative | 3724995 - 3726287 | 47573.0 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS15500 | Not Available | Negative | 3726284 - 3727084 | 30768.7 |
| phytanoyl-coa dioxygenase family protein | PHEP_RS15505 | Not Available | Negative | 3727190 - 3727963 | 29427.5 |
| arac family transcriptional regulator | PHEP_RS15510 | Not Available | Positive | 3728142 - 3729023 | 34171.1 |
| gntr family transcriptional regulator | PHEP_RS15515 | Not Available | Positive | 3729088 - 3730101 | 38263.4 |
| helix-turn-helix domain-containing protein | PHEP_RS15520 | Not Available | Negative | 3730111 - 3730428 | 12038.9 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
