Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | PHEP_RS15430 | Not Available | Positive | 3705199 - 3705732 | 18831.9 |
| serine hydrolase | PHEP_RS15435 | Not Available | Negative | 3705790 - 3706668 | 32818.8 |
| nad-dependent epimerase/dehydratase family protein | PHEP_RS15440 | Not Available | Positive | 3706800 - 3707447 | 23456.0 |
| hypothetical protein | PHEP_RS15445 | Not Available | Negative | 3707464 - 3709350 | 70265.1 |
| tetratricopeptide repeat protein | PHEP_RS15450 | Not Available | Negative | 3709354 - 3712122 | 102955.0 |
| glycoside hydrolase family 88/105 protein | PHEP_RS15455 | Not Available | Negative | 3712125 - 3713849 | 65089.8 |
| 6-phosphogluconolactonase | PHEP_RS15460 | Not Available | Negative | 3713865 - 3714629 | 28517.2 |
| tonb-dependent receptor | PHEP_RS15465 | Not Available | Negative | 3714637 - 3717468 | 103716.0 |
| hypothetical protein | PHEP_RS15470 | Not Available | Negative | 3717517 - 3718764 | 47141.9 |
| beta-n-acetylhexosaminidase | PHEP_RS15475 | Not Available | Negative | 3718751 - 3721282 | 95223.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
