Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | PHEP_RS15380 | Not Available | Positive | 3694731 - 3695921 | 45015.0 |
| cdp-alcohol phosphatidyltransferase family protein | PHEP_RS15385 | Not Available | Positive | 3696037 - 3696747 | 26854.2 |
| gtra family protein | PHEP_RS15390 | Not Available | Positive | 3696747 - 3697208 | 17245.1 |
| outer membrane beta-barrel family protein | PHEP_RS15395 | Not Available | Negative | 3697205 - 3699856 | 100507.0 |
| fecr family protein | PHEP_RS15400 | Not Available | Negative | 3699863 - 3700897 | 39284.9 |
| rna polymerase sigma-70 factor | PHEP_RS15405 | Not Available | Negative | 3700953 - 3701579 | 24346.7 |
| exbd/tolr family protein | PHEP_RS15410 | Not Available | Negative | 3701682 - 3702191 | 18935.0 |
| hypothetical protein | PHEP_RS15415 | Not Available | Negative | 3702279 - 3703151 | 32714.9 |
| helix-turn-helix domain-containing protein | PHEP_RS15420 | Not Available | Negative | 3703158 - 3704327 | 44694.2 |
| hypothetical protein | PHEP_RS15425 | Not Available | Positive | 3704425 - 3705177 | 26498.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
