Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS15330 | Not Available | Positive | 3682925 - 3683134 | 7977.5 |
| abc transporter substrate-binding protein | PHEP_RS15335 | Not Available | Negative | 3683146 - 3683976 | 31148.9 |
| glucose-1-phosphate adenylyltransferase | PHEP_RS15340 | Not Available | Negative | 3683989 - 3685260 | 46571.0 |
| glycogen synthase | PHEP_RS15345 | Not Available | Negative | 3685273 - 3686679 | 53135.9 |
| sulfate adenylyltransferase subunit 1 | PHEP_RS15350 | Not Available | Negative | 3686775 - 3688025 | 46463.4 |
| sulfate adenylyltransferase subunit cysd | PHEP_RS15355 | Not Available | Negative | 3688025 - 3688930 | 34261.7 |
| phosphoadenylyl-sulfate reductase | PHEP_RS15360 | Not Available | Negative | 3688943 - 3689647 | 27532.8 |
| tsup family transporter | PHEP_RS15365 | Not Available | Negative | 3689650 - 3691146 | 53513.2 |
| uroporphyrinogen-iii c-methyltransferase | PHEP_RS15370 | Not Available | Negative | 3691152 - 3691943 | 28338.2 |
| hepn domain-containing protein | PHEP_RS15375 | Not Available | Negative | 3691940 - 3694033 | 78565.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
