Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lola family protein | PHEP_RS15230 | Not Available | Negative | 3662029 - 3662679 | 24435.3 |
| ftsk/spoiiie family dna translocase | PHEP_RS15235 | Not Available | Negative | 3662720 - 3665266 | 95330.4 |
| ankyrin repeat domain-containing protein | PHEP_RS15240 | Not Available | Positive | 3665471 - 3666115 | 22775.4 |
| pspc domain-containing protein | PHEP_RS15245 | Not Available | Negative | 3666116 - 3666337 | 8744.05 |
| duf2851 family protein | PHEP_RS15250 | Not Available | Negative | 3666339 - 3667619 | 49421.5 |
| orotidine-5'-phosphate decarboxylase | PHEP_RS15255 | Not Available | Negative | 3667673 - 3668503 | 30658.9 |
| transcription termination factor rho | PHEP_RS15260 | Not Available | Positive | 3668807 - 3670654 | 68325.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | PHEP_RS15265 | Not Available | Positive | 3670674 - 3671357 | 25393.8 |
| hpt domain-containing protein | PHEP_RS15270 | Not Available | Negative | 3671384 - 3671764 | 14527.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PHEP_RS15275 | Not Available | Negative | 3671782 - 3672276 | 18400.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
