Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 3642762 - 3642835 | Not Available |
| sulfatase family protein | PHEP_RS15135 | Not Available | Positive | 3643027 - 3644538 | 55356.5 |
| duf2147 domain-containing protein | PHEP_RS15140 | Not Available | Negative | 3644696 - 3645127 | 16345.9 |
| duf3347 domain-containing protein | PHEP_RS15145 | Not Available | Negative | 3645181 - 3645744 | 19843.5 |
| efflux rnd transporter periplasmic adaptor subunit | PHEP_RS15150 | Not Available | Negative | 3645774 - 3646994 | 44827.4 |
| efflux rnd transporter periplasmic adaptor subunit | PHEP_RS15155 | Not Available | Negative | 3646997 - 3648217 | 44397.2 |
| tolc family protein | PHEP_RS15160 | Not Available | Negative | 3648195 - 3649448 | 48314.5 |
| efflux rnd transporter permease subunit | PHEP_RS15165 | Not Available | Negative | 3649435 - 3651372 | 71514.4 |
| efflux rnd transporter permease subunit | PHEP_RS15170 | Not Available | Negative | 3651369 - 3652667 | 48191.6 |
| heavy-metal-associated domain-containing protein | PHEP_RS15175 | Not Available | Negative | 3652705 - 3653055 | 12744.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
